Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtfdc1Q99K95 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtfdc1Q99K95 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm8344-201ENSMUST00000119813 856 ntBASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Gm6257-201ENSMUST00000163864 910 ntBASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtfdc1Q99K95 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtfdc1Q99K95 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rtfdc1Q99K95 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
Rtfdc1Q99K95 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtfdc1Q99K95 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtfdc1Q99K95 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtfdc1Q99K95 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms