Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp1aQ921W0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1aQ921W0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.08□□□□□ -0.15
Chmp1aQ921W0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp1aQ921W0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Chmp1aQ921W0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp1aQ921W0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Gm37856-201ENSMUST00000191634 999 ntBASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1aQ921W0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Gm12441-201ENSMUST00000121806 588 ntBASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1aQ921W0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1aQ921W0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1aQ921W0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms