Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Gm8097-201ENSMUST00000117903 829 ntBASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha11Q91Y19 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha11Q91Y19 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Gm8655-201ENSMUST00000221159 852 ntBASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdha11Q91Y19 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha11Q91Y19 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm4535-201ENSMUST00000182274 558 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm8825-201ENSMUST00000182565 998 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm4518-201ENSMUST00000182638 718 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms