Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Gm44251-201ENSMUST00000204963 442 ntBASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb20Q91XZ9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Gm12752-201ENSMUST00000121657 811 ntBASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb20Q91XZ9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Gm5656-201ENSMUST00000171020 1096 ntBASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Gm28659-201ENSMUST00000188013 759 ntBASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb20Q91XZ9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb20Q91XZ9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms