Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Gm17971-201ENSMUST00000190239 806 ntBASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb22Q91XZ8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb22Q91XZ8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb22Q91XZ8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb22Q91XZ8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Gm27459-201ENSMUST00000184860 107 ntBASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb22Q91XZ8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Gm8655-201ENSMUST00000221159 852 ntBASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb22Q91XZ8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms