Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Gm37722-201ENSMUST00000193757 208 ntBASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb4Q91XZ6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Gm18101-201ENSMUST00000215769 548 ntBASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb4Q91XZ6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Gm11355-201ENSMUST00000121120 306 ntBASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Gm9987-201ENSMUST00000069768 567 ntBASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb4Q91XZ6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb4Q91XZ6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Gm18032-201ENSMUST00000222541 538 ntBASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms