Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb8Q91XZ2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.6■□□□□ 0.09
Pcdhb8Q91XZ2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb8Q91XZ2 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.6■□□□□ 0.09
Pcdhb8Q91XZ2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb8Q91XZ2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhb8Q91XZ2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb8Q91XZ2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb8Q91XZ2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
Pcdhb8Q91XZ2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb8Q91XZ2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Gm13836-201ENSMUST00000121159 501 ntBASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb8Q91XZ2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Gm25016-201ENSMUST00000158399 131 ntBASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb8Q91XZ2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm6659-201ENSMUST00000174752 547 ntBASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms