Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga3Q91XY5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga3Q91XY5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Gm25016-201ENSMUST00000158399 131 ntBASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Gm5587-201ENSMUST00000206270 674 ntBASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga3Q91XY5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga3Q91XY5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga3Q91XY5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga3Q91XY5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhga3Q91XY5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhga3Q91XY5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhga3Q91XY5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms