Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm11025-201ENSMUST00000140773 466 ntBASIC15.72■□□□□ 0.11
Vsx1Q91V10 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Gm8396-201ENSMUST00000057361 823 ntBASIC15.72■□□□□ 0.11
Vsx1Q91V10 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vsx1Q91V10 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.71■□□□□ 0.11
Vsx1Q91V10 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.71■□□□□ 0.11
Vsx1Q91V10 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Gm5682-201ENSMUST00000173402 505 ntBASIC15.71■□□□□ 0.11
Vsx1Q91V10 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.71■□□□□ 0.11
Vsx1Q91V10 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vsx1Q91V10 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vsx1Q91V10 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.71■□□□□ 0.1
Vsx1Q91V10 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vsx1Q91V10 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vsx1Q91V10 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.7■□□□□ 0.1
Vsx1Q91V10 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.69■□□□□ 0.1
Vsx1Q91V10 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Gm9172-201ENSMUST00000212092 954 ntBASIC15.69■□□□□ 0.1
Vsx1Q91V10 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.69■□□□□ 0.1
Vsx1Q91V10 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vsx1Q91V10 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vsx1Q91V10 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms