Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb11Q91UZ8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Gm9103-201ENSMUST00000119371 405 ntBASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb11Q91UZ8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb11Q91UZ8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb11Q91UZ8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb11Q91UZ8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb11Q91UZ8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb11Q91UZ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.28■□□□□ 0.2
Pcdhb11Q91UZ8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms