Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Snrnp25Q8VIK1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Gm4459-201ENSMUST00000118750 468 ntBASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Gm6257-201ENSMUST00000163864 910 ntBASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Snrnp25Q8VIK1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Gm12497-201ENSMUST00000138778 237 ntBASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Snrnp25Q8VIK1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Snrnp25Q8VIK1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.65■□□□□ 0.26
Snrnp25Q8VIK1 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms