Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.51■□□□□ 0.23
Trim60Q8VI40 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.51■□□□□ 0.23
Trim60Q8VI40 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Asic1-205ENSMUST00000228185 1818 ntBASIC16.51■□□□□ 0.23
Trim60Q8VI40 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.5■□□□□ 0.23
Trim60Q8VI40 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gm10052-201ENSMUST00000168019 960 ntBASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Gm7729-201ENSMUST00000050143 801 ntBASIC16.5■□□□□ 0.23
Trim60Q8VI40 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim60Q8VI40 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.5■□□□□ 0.23
Trim60Q8VI40 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Gm7889-201ENSMUST00000185591 958 ntBASIC16.49■□□□□ 0.23
Trim60Q8VI40 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim60Q8VI40 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Mir7071-201ENSMUST00000184847 69 ntBASIC16.48■□□□□ 0.23
Trim60Q8VI40 Gm37722-201ENSMUST00000193757 208 ntBASIC16.48■□□□□ 0.23
Trim60Q8VI40 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim60Q8VI40 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim60Q8VI40 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms