Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm15427-201ENSMUST00000117288 531 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm27430-201ENSMUST00000184585 107 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm44333-201ENSMUST00000197168 107 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.65□□□□□ -0.22
Cspg4Q8VHY0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cspg4Q8VHY0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Gm15358-201ENSMUST00000119249 520 ntBASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Gm9899-201ENSMUST00000065519 555 ntBASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cspg4Q8VHY0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm11745-201ENSMUST00000121669 448 ntBASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms