Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.36□□□□□ -0.11
Rab40bQ8VHP8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40bQ8VHP8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40bQ8VHP8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40bQ8VHP8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40bQ8VHP8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40bQ8VHP8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms