Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Gm11594-201ENSMUST00000122313 162 ntBASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx39aQ8VDW0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Psmb5-202ENSMUST00000227257 622 ntBASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx39aQ8VDW0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Gm27628-201ENSMUST00000184911 107 ntBASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx39aQ8VDW0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx39aQ8VDW0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.64■□□□□ 0.42
Ddx39aQ8VDW0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm27646-201ENSMUST00000183989 110 ntBASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx39aQ8VDW0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.63■□□□□ 0.41
Ddx39aQ8VDW0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms