Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chrna3Q8R4G9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chrna3Q8R4G9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chrna3Q8R4G9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Mzt1-203ENSMUST00000227948 952 ntBASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chrna3Q8R4G9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chrna3Q8R4G9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.09
Chrna3Q8R4G9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chrna3Q8R4G9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Chrna3Q8R4G9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms