Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.1■□□□□ 0.33
Nup58Q8R332 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nup58Q8R332 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nup58Q8R332 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.1■□□□□ 0.33
Nup58Q8R332 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.1■□□□□ 0.33
Nup58Q8R332 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.1■□□□□ 0.33
Nup58Q8R332 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nup58Q8R332 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Nup58Q8R332 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Gm11336-201ENSMUST00000118168 334 ntBASIC17.09■□□□□ 0.33
Nup58Q8R332 Gm33142-201ENSMUST00000193913 867 ntBASIC17.09■□□□□ 0.33
Nup58Q8R332 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nup58Q8R332 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nup58Q8R332 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup58Q8R332 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup58Q8R332 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nup58Q8R332 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.08■□□□□ 0.32
Nup58Q8R332 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nup58Q8R332 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nup58Q8R332 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Gm27389-201ENSMUST00000183622 195 ntBASIC17.08■□□□□ 0.32
Nup58Q8R332 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nup58Q8R332 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nup58Q8R332 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nup58Q8R332 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup58Q8R332 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nup58Q8R332 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup58Q8R332 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.06■□□□□ 0.32
Nup58Q8R332 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nup58Q8R332 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nup58Q8R332 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup58Q8R332 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup58Q8R332 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nup58Q8R332 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup58Q8R332 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup58Q8R332 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms