Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm18421-201ENSMUST00000204122 625 ntBASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nudcd3Q8R1N4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nudcd3Q8R1N4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nudcd3Q8R1N4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nudcd3Q8R1N4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms