Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Gm18959-201ENSMUST00000208954 655 ntBASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Gm11336-201ENSMUST00000118168 334 ntBASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afjQ8R1M2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afjQ8R1M2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Mir1668-201ENSMUST00000184114 107 ntBASIC14.79□□□□□ -0.04
H2afjQ8R1M2 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afjQ8R1M2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms