Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Gm6257-201ENSMUST00000163864 910 ntBASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Mir7684-201ENSMUST00000183858 60 ntBASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col23a1Q8K4G2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col23a1Q8K4G2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Gm7488-201ENSMUST00000117148 684 ntBASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Gm7730-201ENSMUST00000212486 454 ntBASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col23a1Q8K4G2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Gm13453-201ENSMUST00000118708 357 ntBASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Gm2272-201ENSMUST00000194903 582 ntBASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col23a1Q8K4G2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Col23a1Q8K4G2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Gm6888-201ENSMUST00000221983 706 ntBASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.2■□□□□ 0.66
Col23a1Q8K4G2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col23a1Q8K4G2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms