Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.38■□□□□ 0.53
Rtn1Q8K0T0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Gm25745-201ENSMUST00000174945 133 ntBASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn1Q8K0T0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Rtn1Q8K0T0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Gm6257-201ENSMUST00000163864 910 ntBASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn1Q8K0T0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms