Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgcs1Q8JZK9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Gm18032-201ENSMUST00000222541 538 ntBASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Hmgcs1Q8JZK9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Mir7071-201ENSMUST00000184847 69 ntBASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.23■□□□□ 0.03
Hmgcs1Q8JZK9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgcs1Q8JZK9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms