Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.1■□□□□ 0.17
Clip4Q8CI96 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clip4Q8CI96 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Clip4Q8CI96 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.09■□□□□ 0.17
Clip4Q8CI96 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Clip4Q8CI96 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.09■□□□□ 0.17
Clip4Q8CI96 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Gm10819-201ENSMUST00000099988 561 ntBASIC16.09■□□□□ 0.17
Clip4Q8CI96 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clip4Q8CI96 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clip4Q8CI96 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Clip4Q8CI96 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clip4Q8CI96 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clip4Q8CI96 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Gm45328-201ENSMUST00000210942 917 ntBASIC16.08■□□□□ 0.16
Clip4Q8CI96 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clip4Q8CI96 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Gm29707-201ENSMUST00000196325 491 ntBASIC16.07■□□□□ 0.16
Clip4Q8CI96 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clip4Q8CI96 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms