Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip3Q8CHD8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Gm37153-201ENSMUST00000193637 231 ntBASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip3Q8CHD8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Gm5682-201ENSMUST00000173402 505 ntBASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab11fip3Q8CHD8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Gm11779-201ENSMUST00000118541 368 ntBASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Gm15467-201ENSMUST00000120582 445 ntBASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab11fip3Q8CHD8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Gm9727-201ENSMUST00000161387 555 ntBASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab11fip3Q8CHD8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms