Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox30Q8CGW4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox30Q8CGW4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox30Q8CGW4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sox30Q8CGW4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Gm11355-201ENSMUST00000121120 306 ntBASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Gm7367-201ENSMUST00000057611 492 ntBASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox30Q8CGW4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox30Q8CGW4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms