Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbm28Q8CGC6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Gm12497-201ENSMUST00000138778 237 ntBASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbm28Q8CGC6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Gm25990-201ENSMUST00000102440 86 ntBASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Gm13418-201ENSMUST00000119097 944 ntBASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rbm28Q8CGC6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rbm28Q8CGC6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rbm28Q8CGC6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rbm28Q8CGC6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rbm28Q8CGC6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Rbm28Q8CGC6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rbm28Q8CGC6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms