Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup88Q8CEC0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Prob1-201ENSMUST00000097619 3021 ntBASIC18.79■□□□□ 0.6
Nup88Q8CEC0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Phf7-203ENSMUST00000226565 1971 ntBASIC18.78■□□□□ 0.6
Nup88Q8CEC0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup88Q8CEC0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Nup88Q8CEC0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
Nup88Q8CEC0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nup88Q8CEC0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.77■□□□□ 0.59
Nup88Q8CEC0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nup88Q8CEC0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.76■□□□□ 0.59
Nup88Q8CEC0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup88Q8CEC0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms