Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.75■□□□□ 0.27
Q8CD60 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Q8CD60 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.75■□□□□ 0.27
Q8CD60 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.75■□□□□ 0.27
Q8CD60 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.75■□□□□ 0.27
Q8CD60 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.75■□□□□ 0.27
Q8CD60 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q8CD60 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.74■□□□□ 0.27
Q8CD60 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Q8CD60 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q8CD60 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.74■□□□□ 0.27
Q8CD60 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.74■□□□□ 0.27
Q8CD60 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Q8CD60 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.74■□□□□ 0.27
Q8CD60 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Q8CD60 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Q8CD60 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Q8CD60 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Q8CD60 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.74■□□□□ 0.27
Q8CD60 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Q8CD60 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q8CD60 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Q8CD60 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.73■□□□□ 0.27
Q8CD60 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Q8CD60 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Q8CD60 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.73■□□□□ 0.27
Q8CD60 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Q8CD60 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.73■□□□□ 0.27
Q8CD60 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.73■□□□□ 0.27
Q8CD60 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.73■□□□□ 0.27
Q8CD60 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.73■□□□□ 0.27
Q8CD60 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.73■□□□□ 0.27
Q8CD60 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.73■□□□□ 0.27
Q8CD60 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q8CD60 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Q8CD60 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.72■□□□□ 0.27
Q8CD60 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.72■□□□□ 0.27
Q8CD60 Gm25406-201ENSMUST00000157599 105 ntBASIC16.72■□□□□ 0.27
Q8CD60 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.72■□□□□ 0.27
Q8CD60 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.72■□□□□ 0.27
Q8CD60 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Q8CD60 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Q8CD60 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q8CD60 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms