Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm8344-201ENSMUST00000119813 856 ntBASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm12260-201ENSMUST00000122447 411 ntBASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ufl1Q8CCJ3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ufl1Q8CCJ3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Gm5264-201ENSMUST00000190584 848 ntBASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ufl1Q8CCJ3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Gm15467-201ENSMUST00000120582 445 ntBASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Gm37935-201ENSMUST00000192012 982 ntBASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ufl1Q8CCJ3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ufl1Q8CCJ3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms