Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf31Q8CCF0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf31Q8CCF0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm8825-201ENSMUST00000182565 998 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm4518-201ENSMUST00000182638 718 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf31Q8CCF0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prpf31Q8CCF0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Mir5131-201ENSMUST00000175426 93 ntBASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf31Q8CCF0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf31Q8CCF0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms