Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc46a2Q8CA03 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc46a2Q8CA03 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gm27463-201ENSMUST00000183569 57 ntBASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Slc46a2Q8CA03 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Gm11336-201ENSMUST00000118168 334 ntBASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms