Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alx1Q8C8B0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alx1Q8C8B0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.56■□□□□ 0.56
Alx1Q8C8B0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alx1Q8C8B0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alx1Q8C8B0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.54■□□□□ 0.56
Alx1Q8C8B0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Alx1Q8C8B0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alx1Q8C8B0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms