Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Eri3Q8C460 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Eri3Q8C460 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Eri3Q8C460 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Eri3Q8C460 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.15■□□□□ 0.02
Eri3Q8C460 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.15■□□□□ 0.02
Eri3Q8C460 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.15■□□□□ 0.02
Eri3Q8C460 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Eri3Q8C460 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Eri3Q8C460 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Eri3Q8C460 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.14■□□□□ 0.01
Eri3Q8C460 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.14■□□□□ 0.01
Eri3Q8C460 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.14■□□□□ 0.01
Eri3Q8C460 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.14■□□□□ 0.01
Eri3Q8C460 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Eri3Q8C460 Mir6404-201ENSMUST00000183699 94 ntBASIC15.14■□□□□ 0.01
Eri3Q8C460 Gm44454-201ENSMUST00000198541 138 ntBASIC15.14■□□□□ 0.01
Eri3Q8C460 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Eri3Q8C460 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Eri3Q8C460 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gm18669-201ENSMUST00000216049 778 ntBASIC15.13■□□□□ 0.01
Eri3Q8C460 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Eri3Q8C460 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Eri3Q8C460 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.13■□□□□ 0.01
Eri3Q8C460 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.12■□□□□ 0.01
Eri3Q8C460 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Eri3Q8C460 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Eri3Q8C460 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Eri3Q8C460 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms