Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cps1Q8C196 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Cps1Q8C196 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cps1Q8C196 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Cps1Q8C196 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.29■■□□□ 1
Cps1Q8C196 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 Gm18057-201ENSMUST00000208220 503 ntBASIC21.29■■□□□ 1
Cps1Q8C196 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC21.29■■□□□ 1
Cps1Q8C196 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.29■■□□□ 1
Cps1Q8C196 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cps1Q8C196 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cps1Q8C196 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC21.28■■□□□ 1
Cps1Q8C196 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Cps1Q8C196 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cps1Q8C196 Gm13223-201ENSMUST00000118609 747 ntBASIC21.28■■□□□ 1
Cps1Q8C196 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC21.28■■□□□ 1
Cps1Q8C196 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC21.28■■□□□ 1
Cps1Q8C196 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC21.28■■□□□ 1
Cps1Q8C196 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC21.28■■□□□ 1
Cps1Q8C196 AC160980.1-201ENSMUST00000224136 970 ntBASIC21.28■■□□□ 1
Cps1Q8C196 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Cps1Q8C196 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.28■■□□□ 1
Cps1Q8C196 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.27■■□□□ 1
Cps1Q8C196 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.27■■□□□ 1
Cps1Q8C196 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC21.27■■□□□ 1
Cps1Q8C196 Gm15693-201ENSMUST00000120470 637 ntBASIC21.27■■□□□ 1
Cps1Q8C196 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC21.27■■□□□ 1
Cps1Q8C196 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC21.27■■□□□ 1
Cps1Q8C196 Gm10499-201ENSMUST00000174094 934 ntBASIC21.27■■□□□ 1
Cps1Q8C196 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC21.27■■□□□ 1
Cps1Q8C196 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.27■■□□□ 1
Cps1Q8C196 Gm10154-201ENSMUST00000084445 354 ntBASIC21.27■■□□□ 1
Cps1Q8C196 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cps1Q8C196 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Gm6018-201ENSMUST00000216090 1306 ntBASIC21.26■□□□□ 0.99
Cps1Q8C196 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC21.26■□□□□ 0.99
Cps1Q8C196 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.26■□□□□ 0.99
Cps1Q8C196 AC157650.3-201ENSMUST00000225058 1476 ntBASIC21.26■□□□□ 0.99
Cps1Q8C196 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cps1Q8C196 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cps1Q8C196 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Cps1Q8C196 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.26■□□□□ 0.99
Cps1Q8C196 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cps1Q8C196 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Gm14722-201ENSMUST00000118943 689 ntBASIC21.25■□□□□ 0.99
Cps1Q8C196 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC21.25■□□□□ 0.99
Cps1Q8C196 AC124732.2-201ENSMUST00000221977 316 ntBASIC21.25■□□□□ 0.99
Cps1Q8C196 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cps1Q8C196 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms