Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp40Q8BWR4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Usp40Q8BWR4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm14822-201ENSMUST00000122247 291 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm24513-201ENSMUST00000174964 138 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm27397-201ENSMUST00000184997 107 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 AC122024.2-201ENSMUST00000220086 871 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Haglr-201ENSMUST00000100000 2085 ntBASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp40Q8BWR4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Mir8117-201ENSMUST00000184773 107 ntBASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Gm9682-201ENSMUST00000197505 556 ntBASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp40Q8BWR4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Usp40Q8BWR4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp40Q8BWR4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp40Q8BWR4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Gm18489-201ENSMUST00000172565 551 ntBASIC21.75■■□□□ 1.07
Usp40Q8BWR4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Usp40Q8BWR4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms