Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Gm25406-201ENSMUST00000157599 105 ntBASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Gm27357-201ENSMUST00000183754 135 ntBASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp43Q8BUM9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp43Q8BUM9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp43Q8BUM9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp43Q8BUM9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp43Q8BUM9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms