Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ppp1r3eQ8BRJ4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ppp1r3eQ8BRJ4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ppp1r3eQ8BRJ4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ppp1r3eQ8BRJ4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ppp1r3eQ8BRJ4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ppp1r3eQ8BRJ4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms