Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab11fip4Q8BQP8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab11fip4Q8BQP8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Gm27459-201ENSMUST00000184860 107 ntBASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip4Q8BQP8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Mir8098-201ENSMUST00000184011 137 ntBASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip4Q8BQP8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Gm5864-201ENSMUST00000202263 970 ntBASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip4Q8BQP8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip4Q8BQP8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms