Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.7■□□□□ 0.1
Ubp1Q811S7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.7■□□□□ 0.1
Ubp1Q811S7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ubp1Q811S7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.69■□□□□ 0.1
Ubp1Q811S7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gm44454-201ENSMUST00000198541 138 ntBASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ubp1Q811S7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.68■□□□□ 0.1
Ubp1Q811S7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.68■□□□□ 0.1
Ubp1Q811S7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ubp1Q811S7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.67■□□□□ 0.1
Ubp1Q811S7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.67■□□□□ 0.1
Ubp1Q811S7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ubp1Q811S7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms