Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mir449b-201ENSMUST00000104833 80 ntBASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Gm22175-201ENSMUST00000175007 78 ntBASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Gpr146-202ENSMUST00000053120 1040 ntBASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Grk6-207ENSMUST00000225925 2769 ntBASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rpap1Q80TE0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Haglr-201ENSMUST00000100000 2085 ntBASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rpap1Q80TE0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC24.51■■□□□ 1.51
Rpap1Q80TE0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Rpap1Q80TE0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Gm9385-201ENSMUST00000117563 472 ntBASIC24.5■■□□□ 1.51
Rpap1Q80TE0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Gm27622-201ENSMUST00000183779 60 ntBASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Rpap1Q80TE0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Gm5626-201ENSMUST00000222151 1058 ntBASIC24.49■■□□□ 1.51
Rpap1Q80TE0 AC126408.1-201ENSMUST00000225184 523 ntBASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rpap1Q80TE0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC24.48■■□□□ 1.51
Rpap1Q80TE0 Nudt18-203ENSMUST00000228768 1578 ntBASIC24.47■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms