Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pif1Q80SX8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.68□□□□□ -0.06
Pif1Q80SX8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.68□□□□□ -0.06
Pif1Q80SX8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pif1Q80SX8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm14140-201ENSMUST00000119999 995 ntBASIC14.67□□□□□ -0.06
Pif1Q80SX8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm27628-201ENSMUST00000184911 107 ntBASIC14.67□□□□□ -0.06
Pif1Q80SX8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.67□□□□□ -0.06
Pif1Q80SX8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pif1Q80SX8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gm7222-201ENSMUST00000117512 906 ntBASIC14.66□□□□□ -0.06
Pif1Q80SX8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gm25406-201ENSMUST00000157599 105 ntBASIC14.66□□□□□ -0.06
Pif1Q80SX8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.66□□□□□ -0.06
Pif1Q80SX8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.66□□□□□ -0.06
Pif1Q80SX8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pif1Q80SX8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.65□□□□□ -0.06
Pif1Q80SX8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gm14494-201ENSMUST00000118786 435 ntBASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Gm43575-201ENSMUST00000196420 516 ntBASIC14.65□□□□□ -0.06
Pif1Q80SX8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pif1Q80SX8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms