Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ShprhQ7TPQ3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 AC126408.1-201ENSMUST00000225184 523 ntBASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Gm15635-204ENSMUST00000208024 2539 ntBASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ShprhQ7TPQ3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 AC140397.2-201ENSMUST00000224213 834 ntBASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ShprhQ7TPQ3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 Gm10499-201ENSMUST00000174094 934 ntBASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ShprhQ7TPQ3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Gm14722-201ENSMUST00000118943 689 ntBASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC22.38■■□□□ 1.17
ShprhQ7TPQ3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Gm25287-201ENSMUST00000103846 110 ntBASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Gm22918-201ENSMUST00000103855 110 ntBASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
ShprhQ7TPQ3 AC131187.1-201ENSMUST00000224567 809 ntBASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 CT030684.1-201ENSMUST00000227292 914 ntBASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Fgf17-202ENSMUST00000227123 1336 ntBASIC22.36■■□□□ 1.17
ShprhQ7TPQ3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Gm28265-201ENSMUST00000188201 2319 ntBASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Gm7336-201ENSMUST00000107041 1232 ntBASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ShprhQ7TPQ3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ShprhQ7TPQ3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms