Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm8Q6ZWM4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm8Q6ZWM4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm8Q6ZWM4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.67■□□□□ 0.26
Lsm8Q6ZWM4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lsm8Q6ZWM4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms