Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.79■□□□□ 0.6
Nup188Q6ZQH8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup188Q6ZQH8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup188Q6ZQH8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup188Q6ZQH8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Mir449b-201ENSMUST00000104833 80 ntBASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup188Q6ZQH8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.77■□□□□ 0.59
Nup188Q6ZQH8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nup188Q6ZQH8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Haglr-201ENSMUST00000100000 2085 ntBASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.76■□□□□ 0.59
Nup188Q6ZQH8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gm8318-201ENSMUST00000182954 872 ntBASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nup188Q6ZQH8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nup188Q6ZQH8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms