Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn10aQ6QIY3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Gm6973-201ENSMUST00000117080 721 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Mir6977-201ENSMUST00000184960 64 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn10aQ6QIY3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm43438-201ENSMUST00000198133 379 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm2810-201ENSMUST00000118681 990 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm5866-201ENSMUST00000177881 973 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Gm27437-201ENSMUST00000183429 107 ntBASIC17.9■□□□□ 0.46
Scn10aQ6QIY3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
Scn10aQ6QIY3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn10aQ6QIY3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Gm11424-201ENSMUST00000121929 829 ntBASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Gm5779-201ENSMUST00000218467 910 ntBASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn10aQ6QIY3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gm24158-201ENSMUST00000175263 71 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gm27618-201ENSMUST00000183671 60 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gm14722-201ENSMUST00000118943 689 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Gm29541-201ENSMUST00000191351 678 ntBASIC17.88■□□□□ 0.45
Scn10aQ6QIY3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn10aQ6QIY3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms