Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Herc4Q6PAV2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Herc4Q6PAV2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Herc4Q6PAV2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.59■□□□□ 0.41
Herc4Q6PAV2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc4Q6PAV2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Herc4Q6PAV2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms