Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Gm15467-201ENSMUST00000120582 445 ntBASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Gm13597-201ENSMUST00000121239 375 ntBASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smchd1Q6P5D8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
Smchd1Q6P5D8 Gm7222-201ENSMUST00000117512 906 ntBASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Gm15358-201ENSMUST00000119249 520 ntBASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smchd1Q6P5D8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Smchd1Q6P5D8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.39■□□□□ 0.38
Smchd1Q6P5D8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smchd1Q6P5D8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Gm45167-201ENSMUST00000208007 322 ntBASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smchd1Q6P5D8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms