Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcf1Q6P542 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcf1Q6P542 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcf1Q6P542 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abcf1Q6P542 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Abcf1Q6P542 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcf1Q6P542 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Gm23634-201ENSMUST00000175071 91 ntBASIC17.86■□□□□ 0.45
Abcf1Q6P542 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.86■□□□□ 0.45
Abcf1Q6P542 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.86■□□□□ 0.45
Abcf1Q6P542 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcf1Q6P542 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.85■□□□□ 0.45
Abcf1Q6P542 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.85■□□□□ 0.45
Abcf1Q6P542 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Abcf1Q6P542 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcf1Q6P542 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.84■□□□□ 0.45
Abcf1Q6P542 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.84■□□□□ 0.45
Abcf1Q6P542 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Abcf1Q6P542 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abcf1Q6P542 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Abcf1Q6P542 App-207ENSMUST00000227737 2827 ntBASIC17.83■□□□□ 0.45
Abcf1Q6P542 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abcf1Q6P542 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abcf1Q6P542 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abcf1Q6P542 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms