Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Gm25406-201ENSMUST00000157599 105 ntBASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl3Q6P1Y1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl3Q6P1Y1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm18733-201ENSMUST00000173950 856 ntBASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm5867-201ENSMUST00000063197 592 ntBASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.41■□□□□ 0.22
Rtl3Q6P1Y1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms