Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt39Q6IFX4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Krt39Q6IFX4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Krt39Q6IFX4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Krt39Q6IFX4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt39Q6IFX4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.63■□□□□ 0.41
Krt39Q6IFX4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt39Q6IFX4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Krt39Q6IFX4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms